Showing 185 of 185 results
Number of displayed results:
- CRISPRi CRISPR screen in WTC11Homo sapiens WTC11, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Lab: Bing Ren, UCSDProject: ENCODE
- proliferation CRISPR screen in glutamatergic neuronHomo sapiens glutamatergic neuron, 14 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in neural progenitor cellHomo sapiens neural progenitor cell, 3 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in WTC11Homo sapiens WTC11, 0 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- STARR-seq in K562Homo sapiens K562 genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in glutamatergic neuronHomo sapiens glutamatergic neuron, 7 days post differentiation genetically modified (episome) using transient transfection, (insertion) using TALEN inserting M. musculus Neurog2Lab: Kevin White, UChicagoProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYBHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYBHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBS1LHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBS1LHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBE1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBE1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociTiling modality: full tilingLab: Pardis Sabeti, BroadProject: ENCODE
- STARR-seq in K562Homo sapiens K562 genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 17 cellMus musculus strain C57BL/6NJ activated T-helper 17 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in glutamatergic neuronHomo sapiens glutamatergic neuron, 14 days post differentiation genetically modified (episome) using transient transfection, (insertion) using TALEN inserting M. musculus Neurog2 originated from WTC11Lab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in WTC11Homo sapiens WTC11 genetically modified (episome) using transient transfection, (insertion) using TALEN inserting M. musculus Neurog2Lab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in activated CD4-positive, CD25-positive, alpha-beta regulatory T cellMus musculus strain C57BL/6NJ activated CD4-positive, CD25-positive, alpha-beta regulatory T cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 17 cellMus musculus strain C57BL/6NJ activated T-helper 17 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 2 cellMus musculus strain C57BL/6NJ activated T-helper 2 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 1 cellMus musculus strain C57BL/6NJ activated T-helper 1 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated naive CD4-positive, alpha-beta T cellMus musculus strain C57BL/6NJ activated naive CD4-positive, alpha-beta T cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in pancreas organoidHomo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfectionElements selection method: accessible genome regions, histone modificationsLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in pancreas organoidHomo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfectionElements selection method: accessible genome regions, histone modifications, DNase hypersensitive sitesLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in pancreas organoidHomo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfectionElements selection method: accessible genome regions, histone modificationsLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in pancreas organoidHomo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfectionElements selection method: accessible genome regions, histone modifications, DNase hypersensitive sitesLab: Kevin White, UChicagoProject: ENCODE
- CRISPRi proliferation screen in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 14 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- CRISPRi proliferation screen in HCT116Homo sapiens HCT116, 0 days post-nucleic acid delivery time genetically modified (insertion) using transduction, using CRISPRi (pgRNA)Elements selection method: histone modificationsTiling modality: peak tilingLab: Bing Ren, UCSDProject: ENCODE
- MPRA in SK-N-SHHomo sapiens SK-N-SH genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in mammary epithelial cellHomo sapiens mammary epithelial cell female genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in HepG2Homo sapiens HepG2 genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in K562Homo sapiens K562 genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in GM12878Homo sapiens GM12878 genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in HEK293Homo sapiens HEK293 genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- MPRA in HEK293Homo sapiens HEK293 genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- perturbation followed by snATAC-seq in GM12878CRISPRi perturbation of GM12878sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in MCF-7CRISPRi perturbation of MCF7sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by snATAC-seq in K562CRISPRi perturbation of K562sLab: Will Greenleaf, StanfordProject: ENCODE
- perturbation followed by scRNA-seq in K562Homo sapiens K562 genetically modified (CRISPRi) using CRISPRLab: Jay Shendure, UWProject: ENCODE
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM ZK216348 (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM ZK216348 for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM RU486 (antagonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM RU486 for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM Mapracorat (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM Mapracorat for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM Hydrocortisone (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM Hydrocortisone for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM GW870086 (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM GW870086 for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfectionLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM dexamethasone (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM dexamethasone (CHEBI:41879) for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM CpdA (antagonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM CpdA for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM CORT108297 for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM AZD9567 (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM AZD9567 for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM AZD2906 (agonist) for 4 hoursLab: Tim Reddy, DukeProject: ENCODETreatment: 1 μM AZD2906 for 4 hours
- perturbation followed by scRNA-seq in K562Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA)Lab: Tim Reddy, DukeProject: ENCODELibrary construction platform: 10X Genomics Chromium Controller
- STARR-seq in K562Homo sapiens K562 genetically modified (episome) using transient transfectionLab: Tim Reddy, DukeProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of WASHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of FARSAHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ZNF385AHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TNPO2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of TIMM17BHomo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SUV39H1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC38A5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of SLC35A2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of GATA2Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of COPG1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of CBX5Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- Flow-FISH CRISPR screen of multiple loci in K562 with PrimeFlow readout of ASNA1Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple lociElements selection method: DNase hypersensitive sitesLoci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OSTiling modality: peak tilingLab: Jesse Engreitz, StanfordProject: ENCODE
- STARR-seq in K562Single human gDNA fragments and concatenated pairs of such fragments were tested for their enhancer activity with eSTARR-seq. The RNAs derived from the transfected plasmids were sequenced and reported here.Elements selection method: transcription start sitesLab: Haiyuan Yu, CornellProject: ENCODE
- STARR-seq in K562Human gDNA fragments were selected based on DHS data, GRO-cap data, and/or histone marks in K562 cells and tested for their enhancer activity with eSTARR-seq. The RNAs derived from the transfected plasmids were sequenced and reported here.Elements selection method: DNase hypersensitive sites, transcription start sites, chromatin statesLab: Haiyuan Yu, CornellProject: ENCODE
- STARR-seq in K562Human gDNA fragments were selected based on DHS data, GRO-cap data, and/or histone marks in K562 cells and tested for their enhancer activity with eSTARR-seq. The RNAs derived from the transfected plasmids were sequenced and reported here.Elements selection method: DNase hypersensitive sites, transcription start sites, chromatin statesLab: Haiyuan Yu, CornellProject: ENCODE
- STARR-seq in K562Homo sapiens K562 genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 20 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 6 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPRi) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPR dCas) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPRa) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPRi) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPR dCas) using CRISPR for CTCF locus
- proliferation CRISPR screen of CTCF locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPRa) using CRISPR for CTCF locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPRi) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPR dCas) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 14 days post-nucleic acid delivery time genetically modified (CRISPRa) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPRi) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPR cutting) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPR dCas) using CRISPR for GATA1 locus
- proliferation CRISPR screen of GATA1 locus in K562Homo sapiens K562, 0 days post-nucleic acid delivery time genetically modified (CRISPRa) using CRISPR for GATA1 locus
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
- CRISPR cutting FACS screen of Dppa2 locus in F123 with endogenous protein Sort-seq readout of Dppa2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Dppa2 locus
- CRISPRi proliferation screen of multiple loci in PC-3Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in DU 145Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in NCI-H460Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in A549Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in MDA-MB-231Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in MCF-7Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in HepG2Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in SW620Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in HCT116Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- CRISPRi proliferation screen of multiple loci in K562Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 100 nM dexamethasone (agonist) for 12 hoursLab: Tim Reddy, DukeProject: GGRTreatment: 100 nM dexamethasone (CHEBI:41879) for 12 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 100 nM dexamethasone (agonist) for 8 hoursLab: Tim Reddy, DukeProject: GGRTreatment: 100 nM dexamethasone (CHEBI:41879) for 8 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 100 nM dexamethasone (agonist) for 4 hoursLab: Tim Reddy, DukeProject: GGRTreatment: 100 nM dexamethasone (CHEBI:41879) for 4 hours
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfection treated with 100 nM dexamethasone (agonist) for 1 hourLab: Tim Reddy, DukeProject: GGRTreatment: 100 nM dexamethasone (CHEBI:41879) for 1 hour
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfectionLab: Tim Reddy, DukeProject: GGR
- STARR-seq in MCF-7Homo sapiens MCF-7 genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in HCT116Homo sapiens HCT116 genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in A549Homo sapiens A549 genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in SH-SY5YHomo sapiens SH-SY5Y genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in HepG2Homo sapiens HepG2 genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE
- STARR-seq in K562Homo sapiens K562 genetically modified (episome) using transient transfectionLab: Kevin White, UChicagoProject: ENCODE