Functional Characterization Experiment summary for ENCSR747HPV
Summary
- Status
- released
- Assay
- CRISPR screen (CRISPR interference screen)
- Biosample summary
- Homo sapiens K562 genetically modified using transduction, CRISPR
- Biosample Type
- cell line
- Examined Loci
- TIMM17B (80-90%)
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Size range
- 200-210
- Platform
- Illumina HiSeq 4000
- Elements references
Attribution
ENCODE4 project
- Lab
- Jesse Engreitz, Stanford
- Award
- UM1HG009436 (Will Greenleaf, Stanford)
- Project
- ENCODE
- Aliases
- jesse-engreitz:CRISPRiFlowFISH-K562-TIMM17B-binE_funccharexp
- Date released
- January 7, 2021
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 2 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS076PIM | ENCGM924EDC, ENCGM912CXW | ENCLB726WWX |
| 1 | 4 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS076PIM | ENCGM924EDC, ENCGM912CXW | ENCLB457UER |
| 1 | 3 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS076PIM | ENCGM924EDC, ENCGM912CXW | ENCLB350VHN |
| 2 | 1 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS045MAC | ENCGM924EDC, ENCGM912CXW | ENCLB187BIA |
| 2 | 2 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS045MAC | ENCGM924EDC, ENCGM912CXW | ENCLB194LAT |
| 1 | 1 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS076PIM | ENCGM924EDC, ENCGM912CXW | ENCLB170GFW |
| 2 | 3 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS045MAC | ENCGM924EDC, ENCGM912CXW | ENCLB184LAO |
| 2 | 4 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS045MAC | ENCGM924EDC, ENCGM912CXW | ENCLB093KBV |