Functional Characterization Experiment summary for ENCSR646KIT

Summary

Status
released
Assay
STARR-seq
Biosample summary
Homo sapiens A549 genetically modified using transient transfection treated with 100 nM dexamethasone for 1 hour
Biosample Type
cell line
Replication type
isogenic
Treatments
100 nM dexamethasone (CHEBI:41879) for 1 hour
Nucleic acid type
RNA
Library starting quantity
10µg
Size range
>300

Attribution

Genomics of Gene Regulation Project
Lab
Tim Reddy, Duke
Award
U01HG007900 (Tim Reddy, Duke)
Project
GGR
External resources
Aliases
tim-reddy:ggr-starrseq-output-dex-01h
Date submitted
November 7, 2019
Date released
December 2, 2019

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
31A549 cell line genetically modified (episome) using transient transfection treated with 100 nM dexamethasone for 1 hourENCBS774UVVENCGM086KMSENCLB582PXP
51A549 cell line genetically modified (episome) using transient transfection treated with 100 nM dexamethasone for 1 hourENCBS907VRCENCGM086KMSENCLB160DAK
11A549 cell line genetically modified (episome) using transient transfection treated with 100 nM dexamethasone for 1 hourENCBS753LMCENCGM086KMSENCLB544FEW
21A549 cell line genetically modified (episome) using transient transfection treated with 100 nM dexamethasone for 1 hourENCBS127QQRENCGM086KMSENCLB565YCR
41A549 cell line genetically modified (episome) using transient transfection treated with 100 nM dexamethasone for 1 hourENCBS296PPIENCGM086KMSENCLB479MWE