1. Functional Characterization Experiments
  2. STARR-seq
  3. Homo sapiens
  4. A549

Functional Characterization Experiment summary for ENCSR543JLA

doi:10.17989/ENCSR543JLA

Summary

Status
released
Assay
STARR-seq
Biosample summary
Homo sapiens A549 genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hours
Biosample Type
cell line
Replication type
isogenic
Treatments
1 μM CORT108297 for 4 hours
Nucleic acid type
RNA
Library starting quantity
75µg
Size range
900-1000
Extraction method
Qiagen RNA extraction
Strand specificity
Strand-specific (reverse)
Controls

Attribution

ENCODE4 project
Lab
Tim Reddy, Duke
Award
UM1HG009428 (Tim Reddy, Duke)
Project
ENCODE
Aliases
tim-reddy:A549-wg-starrseq-CORT108297
Date submitted
June 11, 2021
Date released
June 17, 2021

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
13Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS694UXOENCGM016JFTENCLB810QYD
14Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS694UXOENCGM016JFTENCLB913QBS
23Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS160JHLENCGM016JFTENCLB824VXH
33Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS214ANDENCGM016JFTENCLB362JQM
22Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS160JHLENCGM016JFTENCLB393RMO
42Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS440XSPENCGM016JFTENCLB660CNS
11Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS694UXOENCGM016JFTENCLB659BJK
24Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS160JHLENCGM016JFTENCLB048JQZ
31Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS214ANDENCGM016JFTENCLB319YIS
43Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS440XSPENCGM016JFTENCLB279NLQ
12Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS694UXOENCGM016JFTENCLB565LIZ
21Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS160JHLENCGM016JFTENCLB089OTD
44Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS440XSPENCGM016JFTENCLB179HBY
34Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS214ANDENCGM016JFTENCLB742NER
32Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS214ANDENCGM016JFTENCLB383TLK
41Homo sapiens A549 cell line genetically modified (episome) using transient transfection treated with 1 μM CORT108297 (antagonist) for 4 hoursENCBS440XSPENCGM016JFTENCLB939HHZ

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