Functional Characterization Experiment summary for ENCSR230PPM
doi:10.17989/ENCSR230PPM
Summary
- Status
- released
- Assay
- STARR-seq
- Biosample summary
- Homo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfection
- Biosample Type
- organoid
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Size range
- 200-600
- Fragmentation methods
- shearing (generic)
- Strand specificity
- unstranded
- Platform
- Illumina MiSeq
- Controls
- Elements references
Attribution
ENCODE4 project
- Lab
- Kevin White, UChicago
- Award
- UM1HG009426 (Kevin White, UChicago)
- Project
- ENCODE
- Aliases
- kevin-white:ORI-CAP-STARRseq-U049MAI-batch5
- Date released
- July 26, 2022
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens with pancreatic ductal adenocarcinoma; pancreas organoid genetically modified (episome) using transient transfection | ENCBS906VUP | ENCGM480NSF | ENCLB932DGY |
| 2 | 1 | Homo sapiens with pancreatic ductal adenocarcinoma; pancreas organoid genetically modified (episome) using transient transfection | ENCBS039CUS | ENCGM480NSF | ENCLB345ZMP |