Functional Characterization Experiment summary for ENCSR948LAJ

doi:10.17989/ENCSR948LAJ

Summary

Status
released
Assay
STARR-seq
Biosample summary
Homo sapiens organoid with pancreatic ductal adenocarcinoma; pancreas genetically modified (episome) using transient transfection
Biosample Type
organoid
Replication type
isogenic
Nucleic acid type
RNA
Size range
200-600
Fragmentation methods
shearing (generic)
Strand specificity
unstranded
Controls
Elements references

Attribution

ENCODE4 project
Lab
Kevin White, UChicago
Award
UM1HG009426 (Kevin White, UChicago)
Project
ENCODE
Aliases
kevin-white:ORI-CAP-STARRseq-U049MAI-batch4
Date released
July 26, 2022

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Library
11Homo sapiens with pancreatic ductal adenocarcinoma; pancreas organoid genetically modified (episome) using transient transfectionENCBS230ASEENCGM678NWSENCLB352UBQ
21Homo sapiens with pancreatic ductal adenocarcinoma; pancreas organoid genetically modified (episome) using transient transfectionENCBS620KPHENCGM678NWSENCLB851SKT