Functional Characterization Experiment summary for ENCSR926NDZ
Summary
- Status
- released
- Assay
- STARR-seq
- Biosample summary
- Homo sapiens K562 genetically modified (episome) using transient transfection
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Size range
- 300-800
- Extraction method
- RNeasy
- Strand specificity
- Strand-specific (reverse)
- Platform
- Illumina NextSeq 500
- Controls
- Elements references
Attribution
ENCODE4 project
- Lab
- Tim Reddy, Duke
- Award
- UM1HG009428 (Tim Reddy, Duke)
- Project
- ENCODE
- Aliases
- tim-reddy:wg-starrseq-k562-NA18517_NA18519_NA18858_NA18868_NA18873
- Date released
- February 5, 2024
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection | ENCBS581KMF | ENCGM084OBA | ENCLB484AID |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection | ENCBS685VRL | ENCGM084OBA | ENCLB207OTV |
| 3 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection | ENCBS187RZI | ENCGM084OBA | ENCLB033JKD |