Functional Characterization Experiment summary for ENCSR258QGF
doi:10.17989/ENCSR258QGF
Summary
- Status
- released
- Assay
- STARR-seq
- Biosample summary
- Homo sapiens glutamatergic neuron, 7 days post differentiation genetically modified (episome) using transient transfection, (insertion) using TALEN inserting M. musculus Neurog2
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Size range
- 200-600
- Fragmentation methods
- shearing (generic)
- Strand specificity
- unstranded
- Platform
- Illumina MiSeq
- Controls
Attribution
ENCODE4 project
- Lab
- Kevin White, UChicago
- Award
- UM1HG009426 (Kevin White, UChicago)
- Project
- ENCODE
- Aliases
- kevin-white:ORI-CAP-STARRseq-WTC-11-Ngn2-diff-7-day
- Date released
- March 9, 2023
- Differentiation Series
- ENCSR320WZR
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens male adult (30 years) glutamatergic neuron in vitro differentiated cells genetically modified (episome) using transient transfection, genetically modified (insertion) using TALEN inserting M. musculus Neurog2, 7 days post differentiation | ENCBS555ALW | ENCGM693VPN, ENCGM156EZW | ENCLB910ZUZ |
| 2 | 1 | Homo sapiens male adult (30 years) glutamatergic neuron in vitro differentiated cells genetically modified (episome) using transient transfection, genetically modified (insertion) using TALEN inserting M. musculus Neurog2, 7 days post differentiation | ENCBS624GSV | ENCGM693VPN, ENCGM156EZW | ENCLB770DUF |