Functional Characterization Experiment summary for ENCSR464SPV
doi:10.17989/ENCSR464SPV
Summary
- Status
- released
- Assay
- perturbation followed by scRNA-seq
- Biosample summary
- Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA)
- Biosample Type
- cell line
- Replication type
- unreplicated
- Nucleic acid type
- DNA
- Library construction platform
- 10X Genomics Chromium Controller
- Platform
- Illumina NovaSeq 6000
- Elements references
- Elements cloning
- ENCSR648RKV
Attribution
ENCODE4 project
- Lab
- Tim Reddy, Duke
- Award
- UM1HG009428 (Tim Reddy, Duke)
- Project
- ENCODE
- References
- Aliases
- charles-gersbach:encode4-ceres-dcas9-krab-sc-screen-k562, charles-gersbach:encode4-ceres-dcas9-krab-sc-screen-k562-gex
- Date released
- January 6, 2023
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens K562 cell line genetically modified (insertion) using transduction, genetically modified using CRISPRi (sgRNA) | ENCBS538GQO | ENCGM710IEC, ENCGM809XEK | ENCLB761BDY |