Functional Characterization Experiment summary for ENCSR242OOH
doi:10.17989/ENCSR242OOH
Summary
- Status
- released
- Assay
- CRISPR screen
- Biosample summary
- Homo sapiens K562 genetically modified using CRISPR, transduction
- Biosample Type
- cell line
- Perturbation type
- interference
- Examined loci
- ZNF385A (80-90%)
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Size range
- 200-210
- Platform
- Illumina HiSeq 4000
- Elements references
Attribution
ENCODE4 project
- Lab
- Jesse Engreitz, Stanford
- Award
- UM1HG009436 (Will Greenleaf, Stanford)
- Project
- ENCODE
- Aliases
- jesse-engreitz:CRISPRiFlowFISH-K562-ZNF385A-binE_funccharexp
- Date released
- January 7, 2021
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 2 | 1 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS478MEY | ENCGM924EDC, ENCGM912CXW | ENCLB567YYY |
| 1 | 1 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS884FGG | ENCGM924EDC, ENCGM912CXW | ENCLB420FKT |
| 1 | 3 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS884FGG | ENCGM924EDC, ENCGM912CXW | ENCLB013REV |
| 1 | 4 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS884FGG | ENCGM924EDC, ENCGM912CXW | ENCLB320ZSF |
| 2 | 3 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS478MEY | ENCGM924EDC, ENCGM912CXW | ENCLB327WII |
| 1 | 2 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS884FGG | ENCGM924EDC, ENCGM912CXW | ENCLB583GBD |
| 2 | 2 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS478MEY | ENCGM924EDC, ENCGM912CXW | ENCLB098JFK |
| 2 | 4 | K562 cell line genetically modified (interference) using CRISPR, genetically modified (interference) using transduction | ENCBS478MEY | ENCGM924EDC, ENCGM912CXW | ENCLB350CTC |