Functional Characterization Experiment summary for ENCSR064KUD
doi:10.17989/ENCSR064KUD
Summary
- Status
- released
- Assay
- STARR-seq
- Biosample summary
- Homo sapiens HCT116 genetically modified (episome) using transient transfection
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Size range
- 200-600
- Fragmentation methods
- shearing (generic)
- Strand specificity
- unstranded
- Platform
- Illumina HiSeq 4000
- Controls
Attribution
ENCODE4 project
- Lab
- Kevin White, UChicago
- Award
- UM1HG009426 (Kevin White, UChicago)
- Project
- ENCODE
- Aliases
- kevin-white:ORI-WHG-STARRseq-HCT116
- Date submitted
- October 10, 2019
- Date released
- June 11, 2020
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens HCT116 cell line genetically modified (episome) using transient transfection | ENCBS037ZAD | ENCGM011BGF | ENCLB215HXI |
| 2 | 1 | Homo sapiens HCT116 cell line genetically modified (episome) using transient transfection | ENCBS875RXC | ENCGM011BGF | ENCLB828FDZ |