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CRISPRi Flow-FISH screen in K562 with PrimeFlow readout of MYC
Homo sapiens K562 genetically modified (CRISPRi) using CRISPR
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR443VTK
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYB
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR476KHP
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYB
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR211TEA
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBS1L
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR516MPE
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBS1L
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR298NSD
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBE1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR346PHE
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBE1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR592ONV
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR925WKN
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR974YJG
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR103FXA
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of HBG1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR897GNT
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAPRIN1
CAPRIN1
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR473SLB
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAPRIN1
CAPRIN1
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR450RRS
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAT
CAT
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR687CFN
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of CAT
CAT
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR639EDX
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of PVT1
PVT1
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR913DHP
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYC
MYC
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR580ZYW
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of PVT1
PVT1
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR951RMF
released
CRISPRi Flow-FISH screen in K562 with HCR-FlowFISH readout of MYC
MYC
Tiling modality: full tiling
Lab: Pardis Sabeti, Broad
Project: ENCODE
Functional Characterization Experiment
ENCSR425RUY
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR632VQO
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR274EPF
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR244LQC
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR239YFD
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR209UBX
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of WDR83OS
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR298MDI
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR774WEK
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR938WAX
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR235OSX
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR637ASK
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR034NTW
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of SEC61A1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR983XJL
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR261MNB
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR439ORQ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR417AIR
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR662HLC
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR527GMG
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RPN1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR368YJH
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR353ICQ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR684QJT
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR265XMO
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR338VCJ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR169CXG
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RNASEH2A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR571UMQ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR507XPD
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR274JMZ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR226XFX
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR744VZW
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR296ANQ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAD23A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR235EVH
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR002RHQ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR028IQA
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR497WYB
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR732MPX
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR061EPE
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of RAB7A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR991RLW
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR116VOY
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR657SHO
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR938FTD
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR708OJT
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR074DRW
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PRDX2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR609RED
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR579FRW
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR821VOB
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR203XLZ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR340BXS
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR048WSZ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PQBP1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR710CKZ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR906TMG
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR063QSP
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR381LLB
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR782UNN
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR208BAL
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PPP1R15A
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR065ZKH
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR443ECL
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR410HCJ
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR711ODF
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR810UNL
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR765SJR
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PLP2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR601JKO
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR550MSE
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR721QHU
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR164TJP
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR955LSF
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR351NHK
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of PIM2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR844IEV
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR226BBM
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR875IOR
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR097UHI
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR602DUU
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR014DAS
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of OTUD5
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR498DPH
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR185JLM
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR636HVY
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR550ZDC
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR220YCE
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR473ERS
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NUCB1
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR638GOI
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NFE2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR657MXN
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NFE2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR651CKH
released
CRISPRi Flow-FISH screen of multiple loci in K562 with PrimeFlow readout of NFE2
Homo sapiens K562 genetically modified (insertion) using transduction, using CRISPRi (sgRNA) for multiple loci
Elements selection method: DNase hypersensitive sites
Loci: BAX, BCAT2, TRIR, CALR, CNBP, COPZ1, DHPS, DNASE2, EBP, FTL, FUT1, GATA1, H1FX, HDAC6, HNRNPA1, ITGA5, JUNB, KLF1, LYL1, NFE2, NUCB1, OTUD5, PIM2, PLP2, PPP1R15A, PQBP1, PRDX2, RAB7A, RAD23A, RNASEH2A, RPN1, SEC61A1, WDR83OS
Tiling modality: peak tiling
Lab: Jesse Engreitz, Stanford
Project: ENCODE
Functional Characterization Experiment
ENCSR056IET
released