Showing 24 of 24 results
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- MPRA of SHH locus in NIH3T3Elements cloned into the pGL4Z vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the ZRS enhancer.
- MPRA of SHH locus in NIH3T3Elements cloned into the pGL4Z vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the ZRS enhancer.
- MPRA of ZFAND3 locus in MIN6Elements cloned into the pGL4.23 vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the ZFAND3 enhancer.
- MPRA in Neuro-2aElements cloned into the pGL4.23 vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the ultra conserved element UC88.Lab: Nadav Ahituv, UCSFProject: ENCODE
- MPRA of TCF7L2 locus in MIN6Elements cloned into the pGL4.23 vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the TCF7L2 enhancer.
- MPRA of RET locus in Neuro-2aElements cloned into the pGL3 vector upstream of a minimal promoter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the RET enhancer.
- STARR-seq in activated T-helper 17 cellMus musculus strain C57BL/6NJ activated T-helper 17 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated CD4-positive, CD25-positive, alpha-beta regulatory T cellMus musculus strain C57BL/6NJ activated CD4-positive, CD25-positive, alpha-beta regulatory T cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 17 cellMus musculus strain C57BL/6NJ activated T-helper 17 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 2 cellMus musculus strain C57BL/6NJ activated T-helper 2 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated T-helper 1 cellMus musculus strain C57BL/6NJ activated T-helper 1 cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- STARR-seq in activated naive CD4-positive, alpha-beta T cellMus musculus strain C57BL/6NJ activated naive CD4-positive, alpha-beta T cell genetically modified (episome) using transient transfectionElements selection method: accessible genome regionsLab: Tim Reddy, DukeProject: ENCODE
- MPRA in mammary epithelial cellHomo sapiens mammary epithelial cell female genetically modified (episome) using transient transfectionElements selection method: sequence variantsLab: Ryan Tewhey, JAXProject: ENCODE
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Sox2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locusElements selection method: DNase hypersensitive sitesLoci: Sox2Tiling modality: peak tilingLab: Yin Shen, UCSFProject: ENCODE
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Esrrb, (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locusElements selection method: DNase hypersensitive sitesLoci: EsrrbTiling modality: peak tilingLab: Yin Shen, UCSFProject: ENCODE
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Sox2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locusElements selection method: DNase hypersensitive sitesLoci: Sox2Tiling modality: peak tilingLab: Yin Shen, UCSFProject: ENCODE
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Esrrb, (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locusElements selection method: DNase hypersensitive sitesLoci: EsrrbTiling modality: peak tilingLab: Yin Shen, UCSFProject: ENCODE
- CRISPR cutting FACS screen of Dppa2 locus in F123 with endogenous protein Sort-seq readout of Dppa2Mus musculus F123 genetically modified (insertion) using CRISPR (sgRNA) targeting M. musculus Dppa2, (insertion) using transduction, using CRISPR cutting (sgRNA) for Dppa2 locusElements selection method: DNase hypersensitive sitesLoci: Dppa2Tiling modality: peak tilingLab: Yin Shen, UCSFProject: ENCODE
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
- CRISPR cutting FACS screen of Sox2 locus in F123 with endogenous protein Sort-seq readout of Sox2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Sox2 locus
- CRISPR cutting FACS screen of Esrrb locus in F123 with endogenous protein Sort-seq readout of EsrrbMus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Esrrb locus
- CRISPR cutting FACS screen of Dppa2 locus in F123 with endogenous protein Sort-seq readout of Dppa2Mus musculus F123 genetically modified (insertion) using transduction, using CRISPR cutting (sgRNA) for Dppa2 locus
- CRISPRi proliferation screen of multiple loci in NCI-H460Growth-based CRISPR screen targeting genomic regions near MYC and MYB genes.