Experiment summary for ENCSR617IFZ

doi:10.17989/ENCSR617IFZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF
Biosample Type
cell line
Replication type
isogenic
Description
eGFP-CTCF ChIP-seq on human HEK293 cells.
Nucleic acid type
DNA
Size range
450-650

Attribution

ENCODE3 project
Lab
Michael Snyder, Stanford
Award
U54HG006996 (Michael Snyder, Stanford)
Project
ENCODE
External resources
Aliases
michael-snyder:HEK_eGFP-CTCF_FRT_ChIP
Date submitted
March 31, 2016
Date released
October 7, 2016
Reference Epigenome
ENCSR372WXC 
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Modifications
Antibody
Library
21Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCFENCBS268XWCENCGM511JOPENCAB976SGGENCLB541OLX
11Homo sapiens HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCFENCBS454VNJENCGM511JOPENCAB976SGGENCLB048DBS