Summary for ENCSR598OXI
Summary
- Status
- released
- Description
- This set represents the constituent input control libraries sequenced on HiSeq 2000 platform from which a pooled and subsampled control is derived from for the processing of the ChIP-seq experiments done on eGFP-tagged zinc fingers in the HEK293 cell line
- Donor diversity
- single
- Assay
- ChIP-seq
- Biosample summary
- HEK293 cell line genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF707, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZEB2, genetically modified (insertion) using site-specific recombination targeting H. sapiens SP7, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZBTB1, genetically modified (insertion) using site-specific recombination targeting H. sapiens AEBP2, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF572, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF165, genetically modified (insertion) using site-specific recombination targeting H. sapiens SP2, genetically modified (insertion) using site-specific recombination targeting H. sapiens PRDM12, genetically modified (insertion) using site-specific recombination targeting H. sapiens MAZ, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF423, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF800, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP41, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF18, genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF, genetically modified (insertion) using site-specific recombination targeting H. sapiens SALL4, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN4, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP62, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN5A, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF264, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF32, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP64, genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF655, genetically modified (insertion) using site-specific recombination targeting H. sapiens ATF2
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- J. Michael Cherry, Stanford
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- Aliases
- michael-snyder:HEK_ZNF_HiSeq2000_control_pool
- External resources
- None submitted
Experiments in ENCSR598OXI
Experiments
24 experiments
Accession | Assay | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR007GUS | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens CTCF | Michael Snyder, Stanford | released | |
| ENCSR398UVH | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN5A | Michael Snyder, Stanford | released | |
| ENCSR236FPN | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZEB2 | Michael Snyder, Stanford | released | |
| ENCSR537CWQ | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens SP7 | Michael Snyder, Stanford | released | |
| ENCSR499OOH | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF18 | Michael Snyder, Stanford | released | |
| ENCSR123TVS | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP62 | Michael Snyder, Stanford | released | |
| ENCSR840JVQ | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP41 | Michael Snyder, Stanford | released | |
| ENCSR860UAT | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens PRDM12 | Michael Snyder, Stanford | released | |
| ENCSR311DYU | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF800 | Michael Snyder, Stanford | released | |
| ENCSR049NDP | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF572 | Michael Snyder, Stanford | released | |
| ENCSR782QKO | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens MAZ | Michael Snyder, Stanford | released | |
| ENCSR851FFP | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens AEBP2 | Michael Snyder, Stanford | released | |
| ENCSR468NLK | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF165 | Michael Snyder, Stanford | released | |
| ENCSR110ZVM | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF264 | Michael Snyder, Stanford | released | |
| ENCSR260MAS | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZBTB1 | Michael Snyder, Stanford | released | |
| ENCSR523KUQ | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ATF2 | Michael Snyder, Stanford | released | |
| ENCSR873PPH | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZFP64 | Michael Snyder, Stanford | released | |
| ENCSR316OQD | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF655 | Michael Snyder, Stanford | released | |
| ENCSR736BTL | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens SP2 | Michael Snyder, Stanford | released | |
| ENCSR278MZO | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens SALL4 | Michael Snyder, Stanford | released | |
| ENCSR679WSJ | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF32 | Michael Snyder, Stanford | released | |
| ENCSR603CJM | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF423 | Michael Snyder, Stanford | released | |
| ENCSR361UQO | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZNF707 | Michael Snyder, Stanford | released | |
| ENCSR499QIO | ChIP-seq | Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ZSCAN4 | Michael Snyder, Stanford | released |