Showing 25 of 78 results
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- proliferation CRISPR screen in glutamatergic neuronHomo sapiens glutamatergic neuron, 14 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in neural progenitor cellHomo sapiens neural progenitor cell, 3 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- proliferation CRISPR screen in WTC11Homo sapiens WTC11, 0 days post differentiation genetically modified (CRISPRi) using CRISPR, (insertion) using CRISPR, (insertion) using TALEN inserting M. musculus Neurog2Lab: Yin Shen, UCSFProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for CRISPRi/dCas9-RYBP sparse-tiling proliferation screens at ~7500 cCREs around ~450 essential genes in K562Elements selection method: DNase hypersensitive sitesTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for CRISPRi/dCas9-KRAB-WSR7EEE sparse-tiling proliferation screens at ~7500 cCREs around ~450 essential genes in K562Elements selection method: DNase hypersensitive sitesTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for CRISPRi/dCas9-RYBP sparse-tiling proliferation screens at ~7500 cCREs around ~450 essential genes in K562Elements selection method: DNase hypersensitive sitesTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for CRISPRi/dCas9-KRAB-WSR7EEE sparse-tiling proliferation screens at ~7500 cCREs around ~450 essential genes in K562Elements selection method: DNase hypersensitive sitesTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for CRISPRi/dCas9-KRAB-MGA1-MGA2 sparse-tiling proliferation screens at ~7500 cCREs around ~450 essential genes in K562Elements selection method: DNase hypersensitive sitesTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for dCas9-ZNF705-KRAB/CRISPRi tiling proliferation screens at a subset of cCREs around essential genesElements selection method: DNase hypersensitive sitesTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for dCas9-RYBP/CRISPRi tiling proliferation screens at a subset of cCREs around essential genesElements selection method: DNase hypersensitive sitesTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for dCas9-KRAB-WSR7EEE/CRISPRi tiling proliferation screens at a subset of cCREs around essential genesElements selection method: DNase hypersensitive sitesTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen in K562Functional characterization experiment for dCas9-KRAB/CRISPRi tiling proliferation screens at a subset of cCREs around essential genesElements selection method: DNase hypersensitive sitesTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR dCas proliferation screen in K562Functional characterization experiment for dCas9 tiling proliferation screens at a subset of cCREs around essential genesElements selection method: DNase hypersensitive sitesTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR cutting proliferation screen of CTCF locus in K562Functional characterization experiment for Cas9/CRISPR fine-mapping proliferation screens at hit and non-hit CTCF motifs in loop anchors (and their partner anchors) from the CTCF growth screenElements selection method: TF binding sitesLoci: CTCFTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR cutting proliferation screen of CTCF locus in K562Functional characterization experiment for Cas9/CRISPR fine-mapping proliferation screens at hit and non-hit CTCF motifs in loop anchors (and their partner anchors) from the CTCF growth screenElements selection method: TF binding sitesLoci: CTCFTiling modality: peak tilingLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR cutting proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, Cas9/CRISPRk proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR cutting proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, Cas9/CRISPRk proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9-KRAB/CRISPRi proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRi proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9-KRAB/CRISPRi proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR dCas proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9/CRISPRd proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR dCas proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9/CRISPRd proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRa proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9-VPR/CRISPRa proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPRa proliferation screen of CTCF locus in K562Functional characterization experiment for tiling, dCas9-VPR/CRISPRa proliferation screens at CTCF motifs in loop anchorsElements selection method: TF binding sitesLoci: CTCFTiling modality: sparse peakLab: Will Greenleaf, StanfordProject: ENCODE
- CRISPR dCas proliferation screen of multiple loci in K562Tiling, dCas9/CRISPRd proliferation screen at the GATA1, MYB, and ZMYND8 loci
- CRISPR dCas proliferation screen of multiple loci in K562Tiling, dCas9/CRISPRd proliferation screen at the GATA1, MYB, and ZMYND8 loci