Summary for ENCSR394KIB
doi:10.17989/ENCSR394KIB
Summary
- Status
- released
- Description
- Reference epigenome for human SK-N-MC cell line
- Donor diversity
- single
- Assay
- ChIP-seq, DNase-seq
- Target
- POLR2AphosphoS5, H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens SK-N-MC
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR394KIB
Experiments
7 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR000BPL | ChIP-seq | POLR2AphosphoS5 | Homo sapiens SK-N-MC | Richard Myers, HAIB | released | |
| ENCSR000EPY | DNase-seq | Homo sapiens SK-N-MC | John Stamatoyannopoulos, UW | released | ||
| ENCSR835MMN | ChIP-seq | H3K27ac | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released | |
| ENCSR152QRE | ChIP-seq | H3K4me1 | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released | |
| ENCSR679CHH | ChIP-seq | H3K9me3 | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released | |
| ENCSR287VPM | ChIP-seq | H3K4me3 | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released | |
| ENCSR526PZM | ChIP-seq | H3K36me3 | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000BIX | input library | Homo sapiens SK-N-MC | Richard Myers, HAIB | released | |
| ENCSR899XXQ | input library | Homo sapiens SK-N-MC | Bradley Bernstein, Broad | released |