Summary for ENCSR111DOM
doi:10.17989/ENCSR111DOM
Summary
- Status
- released
- Description
- Time series of RNA-seq on K562 cells treated with a CRISPR gRNA against DGCR8
- Donor diversity
- single
- Assay
- CRISPR genome editing followed by RNA-seq
- Target
- DGCR8
- Biosample summary
- K562 cell line genetically modified (deletion) using CRISPR, genetically modified (deletion) using CRISPR targeting H. sapiens DGCR8
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- Brenton Graveley, UConn
- Award
- U54HG007005 (Brenton Graveley, UConn)
- Project
- ENCODE
- Aliases
- brenton-graveley:DGCR8_BGKcLV02_time-series
- External resources
- None submitted
Experiments in ENCSR111DOM
Experiments
3 experiments
Accession | Duration | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR466TGH | Homo sapiens K562 genetically modified (deletion) using CRISPR targeting H. sapiens DGCR8 | Brenton Graveley, UConn | released | ||
| ENCSR721CNY | Homo sapiens K562 genetically modified (deletion) using CRISPR targeting H. sapiens DGCR8 | Brenton Graveley, UConn | released | ||
| ENCSR148UGK | Homo sapiens K562 genetically modified (deletion) using CRISPR targeting H. sapiens DGCR8 | Brenton Graveley, UConn | released |
Control experiments
3 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR599PZD | non-specific target | Homo sapiens K562 genetically modified (deletion) using CRISPR | Brenton Graveley, UConn | released | |
| ENCSR395HQT | non-specific target | Homo sapiens K562 genetically modified (deletion) using CRISPR | Brenton Graveley, UConn | released | |
| ENCSR619GAS | non-specific target | Homo sapiens K562 genetically modified (deletion) using CRISPR | Brenton Graveley, UConn | released |