Roadmap Epigenomics metadata integrated

October 6, 2015

The Roadmap Epigenomics Mapping Consortium (Roadmap) metadata has been fully incorporated into this site including the standardization of terms and ontologies.

Batch Download

March 9, 2015

Links to download data files for a search result of assays can now be downloaded via the Batch Download feature.

Data release: 3 human and 91 mouse datasets

June 23, 2015

Includes RNA Bind-n-Seq, ChIP-seq, RNA-seq, and WGBS assays


May 28, 2015

To improve transparency about the changes to the objects that comprise the ENCODE metadata schema, we are publishing changelogs for each object

Updates to publications using ENCODE data

May 13, 2015

The community publication page at the ENCODE Portal has been updated to include 519 new publications that use ENCODE data

Graphical display of pipelines

March 11, 2015

Experiment pages have been updated to show a graphical display of pipelines

Data release: 12 human datasets

June 17, 2015

Covers RNA-seq and DNase-seq assays

First announcement: ENCODE Users Meeting

May 3, 2015

ENCODE Users meeting will be held at at the Bolger Center in Potomoc, MD

Data release: 12 human datasets

May 18, 2015

Includes RNA Bind-n-Seq and iCLIP assays

Data release: 28 human datasets

April 13, 2015

Includes RAMPAGE and RNA Bind-n-Seq assays

Data release: 5 human and 3 mouse datasets

January 8, 2015

Eight RNA-seq datasets

Data release: 4 human datasets

March 15, 2015

Four human DNase-seq assays released

Data release: 1 human and 3 mouse datasets

February 12, 2015

Includes ChIP-seq and RNA Bind-n-Seq assays