Experiment summary for ENCSR000BGD

  • Status: released

Summary

Assay
ChIP-seq
Target
POLR2A
Biosample summary
Homo sapiens GM12878
Biosample Type
immortalized cell line
Replication type
isogenic
Description
POLR2A ChIP-seq protocol PCR2x on human GM12878
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date released
July 18, 2011
Submitter comment
Fastq files ENCFF000OBB and ENCFF000OBE contain reads of mixed lengths. Read lengths followed by respective number of reads: ENCFF000OBB (32, 4787991), (36, 49854685); ENCFF000OBE (32, 6912286), (36, 56775540).
Tags
ENCYCLOPEDIAv4 tag

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
21GM12878 immortalized cell lineENCBS110ENCENCAB000AOCENCLB559JUC
11GM12878 immortalized cell lineENCBS110ENCENCAB000AOCENCLB559JUB