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  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR341GVP
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR909JVP
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR820RPI
    released
  • MPRA in K562
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test potential HepG2, K562, and WTC11 enhancers and promoters of all protein-coding genes.
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR203UFY
    released
  • MPRA of PKLR locus in K562
    Elements cloned into the pGL4.11 vector upstream of the reporter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the PKLR promoter.
    Loci: PKLR
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR987WTK
    released
  • MPRA of PKLR locus in K562
    Elements cloned into the pGL4.11 vector upstream of the reporter, with barcode located in the 3' UTR of the reporter. Elementas are generated by error-prone PCR of the PKLR promoter.
    Loci: PKLR
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR845WND
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR971PLA
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR274WZF
    released
  • MPRA of multiple loci in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection for multiple loci
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR363XER
    released
  • MPRA of multiple loci in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection for multiple loci
    Loci: GATA1, MYC
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR917SFD
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: DNase hypersensitive sites, histone modifications, synthetic elements
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR326HQU
    released
  • MPRA in K562
    Homo sapiens K562 genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR147BIK
    released
  • MPRA in K562
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test K562 enhancers and promoters of all protein-coding genes.
    Elements selection method: DNase hypersensitive sites
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR382BVV
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR003TJR
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR135MRI
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR753ZRI
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR997GVD
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR697PNZ
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR653LWA
    released
  • MPRA in K562
    Homo sapiens K562, 24 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR857JFG
    released
  • MPRA in K562
    Homo sapiens K562, 48 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection
    Elements selection method: sequence variants
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR971BEX
    released
  • MPRA of multiple loci in K562
    Homo sapiens K562, 48 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection for multiple loci
    Lab: Ryan Tewhey, JAX
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR394HXI
    released
  • MPRA in K562
    Elements cloned into the lentiMPRA vector upstream of a minimal promoter, with barcode located in the 5' UTR of the reporter. Elements test K562/Hepg2 enhancers as a pilot library to a larger-scale experiment.
    Elements selection method: DNase hypersensitive sites
    Lab: Nadav Ahituv, UCSF
    Project: ENCODE
    Functional Characterization Experiment
    ENCSR460LZI
    released