Functional Characterization Experiment summary for ENCSR394HXI
doi:10.17989/ENCSR394HXI
Summary
- Status
- released
- Assay
- MPRA
- Biosample summary
- Homo sapiens K562, 48 hours post-nucleic acid delivery time genetically modified (episome) using transient transfection for multiple loci
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- RNA
- Fragmentation methods
- none
- Strand specificity
- unstranded
- Platform
- Illumina NextSeq 500
- Controls
- Elements references
- ENCSR770IEL (FEN1, FADS1, FADS2, FADS3, hg19 chr11:61554800-61665820, GRCh38 chr11:61787328-61898348)
- Elements mappings
Attribution
ENCODE4 project
- Lab
- Ryan Tewhey, JAX
- Award
- UM1HG009435 (Pardis Sabeti, Broad)
- Project
- ENCODE
- Aliases
- ryan-tewhey:mpra-OL13-fads-k562
- Date submitted
- July 22, 2020
- Date released
- July 2, 2021
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Modifications | Library |
|---|---|---|---|---|---|
| 3 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection, 48 hours post-nucleic acid delivery time | ENCBS984RTL | ENCGM543PTG | ENCLB573BSY |
| 1 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection, 48 hours post-nucleic acid delivery time | ENCBS984HVY | ENCGM543PTG | ENCLB199QXL |
| 2 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection, 48 hours post-nucleic acid delivery time | ENCBS886BLC | ENCGM543PTG | ENCLB841HTB |
| 4 | 1 | Homo sapiens K562 cell line genetically modified (episome) using transient transfection, 48 hours post-nucleic acid delivery time | ENCBS073BZW | ENCGM543PTG | ENCLB571GOB |