Summary for ENCSR300AUZ
doi:10.17989/ENCSR300AUZ
Summary
- Status
- released
- Description
- Reference Epigenome for human GM23248 cell line
- Donor diversity
- single
- Assay
- polyA plus RNA-seq, RNA-seq, ChIP-seq, small RNA-seq, whole-genome shotgun bisulfite sequencing, microRNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K27me3, H3K9me3, H3K4me3
- Biosample summary
- Homo sapiens GM23248
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR300AUZ
Experiments
12 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|
| ENCSR510QZW | polyA plus RNA-seq | Homo sapiens GM23248 | Barbara Wold, Caltech | released | ||
| ENCSR914AWT | ChIP-seq | H3K36me3 | Homo sapiens GM23248 | Bradley Bernstein, Broad | released | |
| ENCSR866KFY | ChIP-seq | H3K27me3 | Homo sapiens GM23248 | Bradley Bernstein, Broad | released | |
| ENCSR906NGD | ChIP-seq | H3K4me1 | Homo sapiens GM23248 | Bradley Bernstein, Broad | released | |
| ENCSR479HKJ | ChIP-seq | H3K4me3 | Homo sapiens GM23248 | Bradley Bernstein, Broad | released | |
| ENCSR007YOT | ChIP-seq | H3K27ac | Homo sapiens GM23248 | Bradley Bernstein, Broad | released | |
| ENCSR797BPP | RNA-seq | Homo sapiens GM23248 | Thomas Gingeras, CSHL | released | ||
| ENCSR217TAW | DNase-seq | Homo sapiens GM23248 | John Stamatoyannopoulos, UW | released | ||
| ENCSR625HZA | whole-genome shotgun bisulfite sequencing | Homo sapiens GM23248 | Richard Myers, HAIB | released | ||
| ENCSR697KHQ | microRNA-seq | Homo sapiens GM23248 | Ali Mortazavi, UCI | released | ||
| ENCSR489KNQ | small RNA-seq | Homo sapiens GM23248 | Thomas Gingeras, CSHL | released | ||
| ENCSR673OPX | ChIP-seq | H3K9me3 | Homo sapiens GM23248 | Bradley Bernstein, Broad | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR922FLS | input library | Homo sapiens GM23248 | Bradley Bernstein, Broad | released |