Experiment summary for ENCSR866KFY
doi:10.17989/ENCSR866KFY
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K27me3
- Biosample summary
- Homo sapiens GM23248
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 19ng [1-1]21.88ng [2-1]
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 1447
- Date submitted
- April 13, 2016
- Date released
- May 3, 2016
- Reference Epigenome
- ENCSR300AUZ
- Submitter comment
- Fastq file ENCFF514XBK contains conflicting read lengths between data and metadata; read lengths followed by respective number of reads: (25, 64207064). Fastq file ENCFF143XTU contains conflicting read lengths between data and metadata; read lengths followed by respective number of reads: (36, 25355178). Fastq file ENCFF282HVQ contains conflicting read lengths between data and metadata; read lengths followed by respective number of reads: (25, 25355178). Fastq file ENCFF206FVJ specified read length was 25, but the file contains read length(s) (25, 44859225), (36, 25355178). As of January 9th, 2018, metadata has been changed to reflect the data.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 1 | Homo sapiens GM23248 cell line | ENCBS372AAA | ENCAB643NJW | ENCLB866EZN |
| 2 | 1 | Homo sapiens GM23248 cell line | ENCBS367AAA | ENCAB643NJW | ENCLB670CHL |