1. Experiments
  2. polyA plus RNA-seq
  3. Homo sapiens
  4. GM23248

Experiment summary for ENCSR510QZW

doi:10.17989/ENCSR510QZW

Summary

Status
released
Assay
polyA plus RNA-seq
Biosample summary
Homo sapiens GM23248
Biosample Type
cell line
Replication type
isogenic
Description
PolyA RNA-Seq from oligo-dT primed Total RNA on fibroblast of arm
Nucleic acid type
polyadenylated mRNA
Library starting quantity
10ng
Size range
>200
Extraction method
Ambion mirVana
Fragmentation methods
chemical (Nextera tagmentation)
Size selection method
SPRI beads
Strand specificity
unstranded
Spike-ins datasets
ENCSR884LPM

Attribution

ENCODE3 project
Lab
Barbara Wold, Caltech
Award
U54HG006998 (Richard Myers, HAIB)
Project
ENCODE
External resources
Date submitted
April 19, 2016
Date released
May 3, 2016
Reference Epigenome
ENCSR300AUZ 
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag ENCYCLOPEDIAv2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Library
11Homo sapiens GM23248 cell lineENCBS367AAAENCLB956GGO
21Homo sapiens GM23248 cell lineENCBS372AAAENCLB851MTT

Files

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Replicates

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