Experiment summary for ENCSR673OPX
doi:10.17989/ENCSR673OPX
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K9me3
- Biosample summary
- Homo sapiens GM23248
- Biosample Type
- cell line
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Library starting quantity
- 837.5ng [1-1]837.5ng [1-2]615ng [2-1]
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 1448
- Date submitted
- February 19, 2015
- Date released
- June 9, 2017
- Reference Epigenome
- ENCSR300AUZ
- Submitter comment
- Fastq file ENCFF745KKI contains reads of mixed lengths; read lengths followed by respective number of reads: (25, 44232636), (36, 19510253). Fastq file ENCFF391STU contains reads of mixed lengths; read lengths followed by respective number of reads: (25, 45254180), (36, 29964721).
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens GM23248 cell line | ENCBS372AAA | ENCAB000APY | ENCLB419HWH |
1 | 2 | Homo sapiens GM23248 cell line | ENCBS372AAA | ENCAB000APY | ENCLB288UHO |
2 | 1 | Homo sapiens GM23248 cell line | ENCBS367AAA | ENCAB000APY | ENCLB027KPP |