Experiment summary for ENCSR000EUZ

Summary

Status
released
Assay
ChIP-seq
Target
TRIM28
Biosample summary
Homo sapiens HEK293
Biosample Type
cell line
Replication type
isogenic
Description
TRIM28 ChIP-seq on human HEK293
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Peggy Farnham, USC
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
December 6, 2010
Date released
October 29, 2011
Submitter comment
Fastq files ENCFF000WYV and ENCFF000WYW contain reads of mixed lengths. Read lengths followed by respective number of reads: ENCFF000WYV (32, 21047886), (36, 48358172); ENCFF000WYW (32, 41799054), (36, 49579320).
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11HEK293 cell lineENCBS479AAAENCAB000AIEENCLB920PRJ
21HEK293 cell lineENCBS264HQLENCAB000AIEENCLB870LTI