Experiment summary for ENCSR000DPM
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens AG04450
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human AG04450
- Nucleic acid type
- DNA
- Lysis method
- see document
- Extraction method
- see document
- Fragmentation methods
- see document
- Size selection method
- see document
- Strand specificity
- Non-strand-specific
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Related datasets
- ENCSR604KIW Reference epigenome for human AG04450 cell line
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS004ENC but it has since been corrected to the current biosample. Please note that the biosample term has remain unchanged.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | AG04450 cell line | ENCBS554API | ENCAB000AFP | ENCLB978XJK |
1 | 1 | AG04450 cell line | ENCBS004ENC | ENCAB000AFP | ENCLB746XGY |