Experiment summary for ENCSR000DPM
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens AG04450
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human AG04450
- Nucleic acid type
- DNA
- Lysis method
- see document
- Extraction method
- see document
- Fragmentation methods
- see document
- Size selection method
- see document
- Strand specificity
- Non-strand-specific
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Related datasets
- ENCSR604KIW Reference epigenome for human AG04450 cell line
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS004ENC but it has since been corrected to the current biosample. Please note that the biosample term has remain unchanged.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | AG04450 cell line | ENCBS554API | ENCAB000AFP | ENCLB978XJK |
| 1 | 1 | AG04450 cell line | ENCBS004ENC | ENCAB000AFP | ENCLB746XGY |