Summary for ENCSR604KIW
doi:10.17989/ENCSR604KIW
Summary
- Status
- released
- Description
- Reference epigenome for human AG04450 cell line
- Donor diversity
- single
- Assay
- ChIP-seq, small RNA-seq, polyA plus RNA-seq, DNase-seq
- Target
- H3K27ac, H3K9me3, H3K27me3, H3K4me3, CTCF
- Biosample summary
- Homo sapiens AG04450
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR604KIW
Experiments
8 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR000DPM | ChIP-seq | CTCF | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released | |
ENCSR000ELY | DNase-seq | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released | ||
ENCSR000DPO | ChIP-seq | H3K4me3 | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released | |
ENCSR000DPK | ChIP-seq | H3K27me3 | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released | |
ENCSR000DPL | ChIP-seq | H3K27ac | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released | |
ENCSR000COO | polyA plus RNA-seq | Homo sapiens AG04450 | Thomas Gingeras, CSHL | released | ||
ENCSR000CRI | small RNA-seq | Homo sapiens AG04450 | Thomas Gingeras, CSHL | released | ||
ENCSR000DPJ | ChIP-seq | H3K9me3 | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR000DPN | input library | Homo sapiens AG04450 | John Stamatoyannopoulos, UW | released |