Experiment summary for ENCSR000BGC
doi:10.17989/ENCSR000BGC
Superseded by ENCSR331HPA
Summary
- Status
- archived
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- GABPA
- Biosample summary
- Homo sapiens GM12878
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- GABPA ChIP-seq protocol PCR2x on human GM12878
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Date released
- July 18, 2011
- Submitter comment
- Fastq file ENCFF000NWM contains reads of mixed lengths. Read lengths followed by respective number of reads: (32, 30362970), (36, 27958912)
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens GM12878 cell line | ENCBS110ENC | ENCAB000AGR | ENCLB559JCA |
1 | 1 | Homo sapiens GM12878 cell line | ENCBS110ENC | ENCAB000AGR | ENCLB559JBZ |