Search – ENCODE

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Report Annotation matrix

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Annotation file set: Unified catalog of predictive, deep learning-derived DNA sequence motifs from TF ChIP-seq (BPNet) and chromatin accessibility (ChromBPNet)
Lab: Anshul Kundaje, Stanford
Project: ENCODE
Annotation
ENCSR091GRD
released
Annotation file set: Reference TF binding motifs used to annotate BPNet/ChromBPNet sequence motifs in the TF-MoDISco sequence motif reports, based on external TF binding motif databases
Lab: Anshul Kundaje, Stanford
Project: ENCODE
Annotation
ENCSR539WIY
released
Annotation file set: enhancer gene links in HCT116 cell line
Lab: Roderic Guigo, CRG
Project: ENCODE
Annotation
ENCSR813LKH
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO015AAA/) in Mus_musculus_strain_129/Ola_ES-E14
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR330OBY
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_liver_tissue_embryo_14.5_days_ENCDO956IXV
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR132BPO
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO469XMJ/) in Mus_musculus_strain_C57BL/6_forebrain_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR937LTC
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_embryonic_facial_prominence_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR020HPA
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO469XMJ/) in Mus_musculus_strain_C57BL/6_intestine_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR948XQG
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_midbrain_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR043KUG
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_limb_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR115YDD
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_hindbrain_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR270ENO
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_intestine_tissue_postnatal_0_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR055WLI
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO072AAA/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_cerebellum_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR356AGE
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO072AAA/) in Mus_musculus_strain_C57BL/6_spleen_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR452WBQ
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO072AAA/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_heart_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR078RHM
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO072AAA/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_lung_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR820GTH
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO072AAA/) in Mus_musculus_strain_C57BL/6_liver_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR768TYH
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO072AAA/) in Mus_musculus_strain_C57BL/6_brain_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR526WJX
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO072AAA/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_thymus_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR908BXR
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO072AAA/) in Mus_musculus_strain_C57BL/6_kidney_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR193KKP
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO072AAA/) in Mus_musculus_strain_C57BL/6_liver_tissue_male_adult_8_weeks
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR124WJM
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_stomach_tissue_postnatal_0_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR731YJS
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO469XMJ/) in Mus_musculus_strain_C57BL/6_lung_tissue_embryo_14.5_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR297ELU
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO956IXV/, /mouse-donors/ENCDO469XMJ/) in Mus_musculus_strain_C57BL/6_liver_tissue_postnatal_0_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR975BIN
released
Annotation file set: candidate regulatory elements for mm10 (/mouse-donors/ENCDO469XMJ/, /mouse-donors/ENCDO956IXV/) in Mus_musculus_strain_C57BL/6_heart_tissue_postnatal_0_days
Lab: Zhiping Weng, UMass
Project: ENCODE
Annotation
ENCSR081HRU
released