Experiment summary for ENCSR871MKQ
doi:10.17989/ENCSR871MKQ
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens H9
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on H9
- Nucleic acid type
- DNA
- Size range
- 200-600
- Fragmentation methods
- sonication (generic)
- Platform
- Illumina NextSeq 500
- Controls
Attribution
ENCODE4 project
- Lab
- Bradley Bernstein, Broad
- Award
- UM1HG009390 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 5077
- Date released
- April 13, 2021
- Reference Epigenome
- ENCSR323FKB
- Differentiation Series
- ENCSR880EGY
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 1 | 2 | Homo sapiens H9 cell line | ENCBS654ADT | ENCAB719MQZ | ENCLB569CWY |
| 2 | 1 | Homo sapiens H9 cell line | ENCBS713BMM | ENCAB719MQZ | ENCLB862VLL |
| 1 | 1 | Homo sapiens H9 cell line | ENCBS654ADT | ENCAB719MQZ | ENCLB978FBZ |
| 2 | 2 | Homo sapiens H9 cell line | ENCBS713BMM | ENCAB719MQZ | ENCLB887ADQ |
| 3 | 2 | Homo sapiens H9 cell line | ENCBS877WZR | ENCAB719MQZ | ENCLB025JJO |
| 3 | 1 | Homo sapiens H9 cell line | ENCBS877WZR | ENCAB719MQZ | ENCLB308VLR |