Summary for ENCSR323FKB
doi:10.17989/ENCSR323FKB
Summary
- Status
- released
- Description
- Reference epigenome for human H9 cell line
- Donor diversity
- single
- Assay
- RNA-seq, DNase-seq, microRNA-seq, ChIP-seq
- Target
- H3K27me3, H3K4me1, H3K36me3, CTCF, H3K9me3, H3K4me3
- Biosample summary
- H9 cell line stably expressing C-terminal eGFP-tagged HES5
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR323FKB
Experiments
9 experiments
Accession | Assay | Target | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|---|
ENCSR754VAJ | ChIP-seq | H3K27me3 | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR870IUC | ChIP-seq | H3K36me3 | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR716ZJH | ChIP-seq | H3K4me3 | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR967HXD | ChIP-seq | H3K4me1 | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR516KSY | ChIP-seq | H3K9me3 | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR871MKQ | ChIP-seq | CTCF | Homo sapiens H9 | Bradley Bernstein, Broad | released | |
ENCSR071LFN | microRNA-seq | Homo sapiens H9 | Ali Mortazavi, UCI | released | ||
ENCSR712BRU | RNA-seq | Homo sapiens H9 | Barbara Wold, Caltech | released | ||
ENCSR275ICP | DNase-seq | Homo sapiens H9 | John Stamatoyannopoulos, UW | released |
Control experiments
2 control experiments
Accession | Control type | Biosample summary | Lab | Status | Cart |
---|---|---|---|---|---|
ENCSR625CEM | input library | Homo sapiens H9 stably expressing HES5 | Bradley Bernstein, Broad | released | |
ENCSR686HII | input library | Homo sapiens H9 | Bradley Bernstein, Broad | released |