Summary for ENCSR323FKB

doi:10.17989/ENCSR323FKB

Summary

Status
released
Description
Reference epigenome for human H9 cell line
Donor diversity
single
Assay
RNA-seq, DNase-seq, microRNA-seq, ChIP-seq
Target
H3K27me3, H3K4me1, H3K36me3, CTCF, H3K9me3, H3K4me3
Biosample summary
H9 cell line stably expressing C-terminal eGFP-tagged HES5
Diseases
Not reported

Attribution

ENCODE3 project
Lab
ENCODE Consortium
Award
U41HG006992 (J. Michael Cherry, Stanford)
Project
ENCODE
External resources

Experiments in ENCSR323FKB

Experiments
9 experiments
Accession
Assay
Target
Biosample summary
Lab
Status
Cart
ENCSR754VAJChIP-seqH3K27me3Homo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR870IUCChIP-seqH3K36me3Homo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR716ZJHChIP-seqH3K4me3Homo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR967HXDChIP-seqH3K4me1Homo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR516KSYChIP-seqH3K9me3Homo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR871MKQChIP-seqCTCFHomo sapiens H9Bradley Bernstein, Broad
released
ENCSR071LFNmicroRNA-seqHomo sapiens H9Ali Mortazavi, UCI
released
ENCSR712BRURNA-seqHomo sapiens H9Barbara Wold, Caltech
released
ENCSR275ICPDNase-seqHomo sapiens H9John Stamatoyannopoulos, UW
released
Control experiments
2 control experiments
Accession
Control type
Biosample summary
Lab
Status
Cart
ENCSR625CEMinput libraryHomo sapiens H9 stably expressing HES5Bradley Bernstein, Broad
released
ENCSR686HIIinput libraryHomo sapiens H9Bradley Bernstein, Broad
released