Experiment summary for ENCSR405NQJ
doi:10.17989/ENCSR405NQJ
Summary
- Status
- released
- Assay
- ChIP-seq (Histone ChIP-seq)
- Target
- H3K9me3
- Biosample summary
- Homo sapiens neural cell originated from H1
- Biosample Type
- in vitro differentiated cells
- Replication type
- isogenic
- Nucleic acid type
- DNA
- Size range
- 200-600 [2-1]300-800 [1-1]
- Fragmentation methods
- shearing (Covaris generic) [2-1]sonication (generic) [1-1]
- Platform
- Illumina HiSeq 2000, Illumina HiSeq 2500
- Controls
Attribution
ENCODE3 project
- Lab
- Bradley Bernstein, Broad
- Award
- U54HG006991 (Bradley Bernstein, Broad)
- Project
- ENCODE
- External resources
- Aliases
- bradley-bernstein:Project Element 13
- Date submitted
- December 5, 2014
- Date released
- May 3, 2016
- Reference Epigenome
- ENCSR477LDX
- Submitter comment
- Files ENCFF705YPK, ENCFF846IQN had incorrectly identified paired_end 1 and 2 metadata respectively. They have been corrected to match its fastq file flowcell signature accordingly.
- Tags
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | Homo sapiens male embryo neural in vitro differentiated cells originated from H1 | ENCBS737HIZ | ENCAB000APY | ENCLB360ROS |
| 1 | 1 | Homo sapiens male embryo neural in vitro differentiated cells originated from H1 | ENCBS504GFW | ENCAB000AUR | ENCLB876SYZ |