Experiment summary for ENCSR066BZZ

doi:10.17989/ENCSR066BZZ

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens bipolar neuron originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 days
Biosample Type
in vitro differentiated cells
Replication type
isogenic
Treatments
0.5 μg/mL doxycycline hyclate (CHEBI:34730) for 4 days
Nucleic acid type
DNA
Size range
200-600
Fragmentation methods
sonication (generic)
Controls

Attribution

ENCODE3 project
Lab
Bradley Bernstein, Broad
Award
U54HG006991 (Bradley Bernstein, Broad)
Project
ENCODE
External resources
Aliases
bradley-bernstein:Project Element 1473
Date submitted
December 10, 2015
Date released
November 24, 2016
Reference Epigenome
ENCSR954HHV 
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens male adult (53 years) bipolar neuron in vitro differentiated cells originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 daysENCBS374AAAENCAB000AXXENCLB109JJP
21Homo sapiens male adult (53 years) bipolar neuron in vitro differentiated cells originated from GM23338 treated with 0.5 μg/mL doxycycline hyclate for 4 daysENCBS369AAAENCAB000AXXENCLB863GNC