Experiment summary for ENCSR000EWD
doi:10.17989/ENCSR000EWD
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- SETDB1
- Biosample summary
- Homo sapiens K562
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- SETDB1 ChIP-seq on human K562 treated with MNaseD
- Nucleic acid type
- DNA
- Fragmentation methods
- chemical (micrococcal nuclease)
- Platform
- Illumina Genome Analyzer
- Controls
Attribution
ENCODE2 project
- Lab
- Peggy Farnham, USC
- Award
- U54HG004558 (Michael Snyder, Stanford)
- Project
- ENCODE
- External resources
- Date submitted
- December 6, 2010
- Date released
- May 14, 2012
- Annotation (gkmsvm-model)
- Submitter comment
- The cross correlation for this ChIP-seq experiment was too poor for peaks to be called.
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
1 | 1 | Homo sapiens K562 cell line | ENCBS667AAA | ENCAB000AKP | ENCLB873KRS |
2 | 1 | Homo sapiens K562 cell line | ENCBS667AAA | ENCAB000AKP | ENCLB054WJM |