Experiment summary for ENCSR000EWD

Summary

Status
released
Assay
ChIP-seq
Target
SETDB1
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
SETDB1 ChIP-seq on human K562 treated with MNaseD
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
chemical (micrococcal nuclease)
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Peggy Farnham, USC
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
December 6, 2010
Date released
May 14, 2012
Submitter comment
The cross correlation for this ChIP-seq experiment was too poor for peaks to be called.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 cell lineENCBS667AAAENCAB000AKPENCLB873KRS
21K562 cell lineENCBS667AAAENCAB000AKPENCLB054WJM