1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR000EWD

doi:10.17989/ENCSR000EWD

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
SETDB1
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
SETDB1 ChIP-seq on human K562 treated with MNaseD
Nucleic acid type
DNA
Fragmentation methods
chemical (micrococcal nuclease)
Controls

Attribution

ENCODE2 project
Lab
Peggy Farnham, USC
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
December 6, 2010
Date released
May 14, 2012
Annotation (gkmsvm-model)
Submitter comment
The cross correlation for this ChIP-seq experiment was too poor for peaks to be called.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS667AAAENCAB000AKPENCLB873KRS
21Homo sapiens K562 cell lineENCBS667AAAENCAB000AKPENCLB054WJM

Files

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Replicates

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