Experiment summary for ENCSR000EUU

Summary

Status
released
Assay
ChIP-seq
Target
POLR2A
Biosample summary
Homo sapiens HCT116
Biosample Type
cell line
Replication type
isogenic
Description
POLR2A ChIP-seq on human HCT-116
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Peggy Farnham, USC
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
December 6, 2010
Date released
October 29, 2011
Related datasets
ENCSR361KMF 
Reference epigenome for HCT116 (child)
Submitter comment
The data quality is too poor for peak analysis for hg19. Not enough peaks can be called. The GRCh38 data should also be used with caution.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11HCT116 cell lineENCBS409MTTENCAB000AOCENCLB594VMH
21HCT116 cell lineENCBS409MTTENCAB000AOCENCLB990PEE