Experiment summary for ENCSR000EGM

  • Status: released

Summary

Assay
ChIP-seq
Target
CTCF
Biosample summary
Homo sapiens K562
Biosample Type
immortalized cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human K562 produced by the Snyder lab
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date released
May 14, 2012
Submitter comment
Processing cannot be completed on the GRCh38 assembly at this time due to a failure in peak calling.
Tags
ENCYCLOPEDIAv4 tag

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 immortalized cell lineENCBS039ENCENCAB000AFQENCLB209AIN
21K562 immortalized cell lineENCBS039ENCENCAB000AFQENCLB209AVT