Experiment summary for ENCSR000EGM

Summary

Status
released
Assay
ChIP-seq
Target
CTCF
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human K562 produced by the Snyder lab
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
May 14, 2012
Date released
May 14, 2012
Related datasets
ENCSR612NLL 
Reference Epigenome of K562
Submitter comment
Processing cannot be completed on the GRCh38 assembly at this time due to a failure in peak calling.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11K562 cell lineENCBS039ENCENCAB000AFQENCLB209AIN
21K562 cell lineENCBS039ENCENCAB000AFQENCLB209AVT