Experiment summary for ENCSR000DZN

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human GM12878
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation methods
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Michael Snyder, Stanford
Award
U54HG004558 (Michael Snyder, Stanford)
Project
ENCODE
Date submitted
October 29, 2011
Date released
October 29, 2011
Related datasets
ENCSR447YYN 
Reference epigenome for human GM12878 cell line
Submitter comment
As of March 24, 2017, this experiment has been reanalyzed to reflect the same mapped read length as its control (ENCSR000EYX).
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv5Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21GM12878 cell lineENCBS630AAAENCAB000AFQENCLB209ABS
11GM12878 cell lineENCBS630AAAENCAB000AFQENCLB209ABM