Experiment summary for ENCSR000DWQ

Summary

Status
released
Assay
ChIP-seq
Target
CTCF
Biosample summary
Homo sapiens foreskin fibroblast male newborn
Biosample Type
primary cell
Replication type
isogenic
Description
CTCF ChIP-seq on human NHDF-neo
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
June 25, 2011
Date released
January 17, 2012
Related datasets
ENCSR571AGY 
Reference epigenome for foreskin fibroblast (newborn)
Submitter comment
Replicate 1,1 of this experiment was previously attributed to biosample ENCBS065ENC and replicate 2,1 of this experiment was previously attributed to biosample ENCBS065ENC but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11male newborn foreskin fibroblast primary cellENCBS748WVAENCAB000AFPENCLB372NFI
21male newborn foreskin fibroblast primary cellENCBS271PJPENCAB000AFPENCLB761GCS