Experiment summary for ENCSR000DRZ
Summary
- Status
- released
- Assay
- ChIP-seq
- Target
- CTCF
- Biosample summary
- Homo sapiens GM12878
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human GM12878
- Nucleic acid type
- DNA
- Lysis method
- see document
- Extraction method
- see document
- Fragmentation method
- see document
- Size selection method
- see document
- Strand specificity
- Non-strand-specific
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS195XMM and replicate 1,1 of this experiment was previously attributed to biosample ENCBS195XMM but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Tags
Isogenic replicates
| Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
|---|---|---|---|---|---|
| 2 | 1 | GM12878 cell line | ENCBS506MRD | ENCAB000AFP | ENCLB638PNX |
| 1 | 1 | GM12878 cell line | ENCBS657FSS | ENCAB000AFP | ENCLB667MZC |