Experiment summary for ENCSR000DRB
doi:10.17989/ENCSR000DRB
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- CTCF
- Biosample summary
- Homo sapiens GM12864
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- CTCF ChIP-seq on human GM12864
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer II
- Controls
Attribution
ENCODE2 project
- Lab
- John Stamatoyannopoulos, UW
- Award
- U54HG004592 (John Stamatoyannopoulos, UW)
- Project
- ENCODE
- External resources
- Date submitted
- March 17, 2011
- Date released
- March 17, 2011
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- Replicate 2,1 of this experiment was previously attributed to biosample ENCBS208AAA and replicate 3,1 of this experiment was previously attributed to biosample ENCBS208AAA and replicate 1,1 of this experiment was previously attributed to biosample ENCBS208AAA but they have since been corrected to the current biosamples. Please note that the biosample term has remain unchanged.
- Registry of cCREs
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens GM12864 cell line | ENCBS315VRM | ENCAB000AFP | ENCLB963KYV |
3 | 1 | Homo sapiens GM12864 cell line | ENCBS605TTN | ENCAB000AFP | ENCLB422TOP |
1 | 1 | Homo sapiens GM12864 cell line | ENCBS892LHC | ENCAB000AFP | ENCLB887FIG |