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  3. Homo sapiens
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Experiment summary for ENCSR000DQI

doi:10.17989/ENCSR000DQI

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens BJ
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq on human foreskin fibroblast cell
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
John Stamatoyannopoulos, UW
Award
U54HG004592 (John Stamatoyannopoulos, UW)
Project
ENCODE
Date submitted
March 17, 2011
Date released
March 17, 2011
Reference Epigenome
ENCSR865DMB 
Annotation (gkmsvm-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag ccre_inputv2Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens BJ cell lineENCBS693PNCENCAB000AFPENCLB669WNO
11Homo sapiens BJ cell lineENCBS488ZLUENCAB000AFPENCLB029LBI

Files

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Output type
Replicates

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