Experiment summary for ENCSR000DLW

doi:10.17989/ENCSR000DLW

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens endothelial cell of umbilical vein newborn
Biosample Type
primary cell
Replication type
isogenic
Description
CTCF ChIP-seq on human HUVEC
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Vishwanath Iyer, UTA
Award
U54HG004563 (Gregory Crawford, Duke)
Project
ENCODE
Date submitted
March 17, 2011
Date released
March 17, 2011
Reference Epigenome
ENCSR194DQD 
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Submitter comment
As of August 2022, the donors associated with the biosamples in this dataset were changed from ENCDO000AAS to ENCDO466MPW and ENCDO560UMK. See PMID:32728101.
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens newborn endothelial of umbilical vein primary cellENCBS669AAAENCAB000AXYENCLB429LRR
21Homo sapiens newborn endothelial of umbilical vein primary cellENCBS669AAAENCAB000AXYENCLB634FVR