Experiment summary for ENCSR000CUF
doi:10.17989/ENCSR000CUF
Summary
- Status
- released
- Assay
- RNA-seq (total RNA-seq)
- Biosample summary
- Homo sapiens osteoblast female adult (56 years) and male adult (62 years)
- Biosample Type
- primary cell
- Replication type
- anisogenic
- Description
- RNA-seq on human HOB whole cell long total RNA.The libraries contained in this experiment come from osteoblast primary whole cells, HOB isolated from independent donors. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA > 200 nucleotides in size.
- Nucleic acid type
- RNA
- Depleted in
- rRNA
- Size range
- >200
- Fragmentation methods
- see document
- Strand specificity
- Strand-specific (reverse)
- Spike-ins datasets
- ENCSR470JZL
- Platform
- Illumina HiSeq 2000
Attribution
ENCODE2 project
- Lab
- Thomas Gingeras, CSHL
- Award
- U54HG004557 (Thomas Gingeras, CSHL)
- Project
- ENCODE
- External resources
- UCSC-ENCODE-hg19:wgEncodeEH002675
- GEO-obsolete:GSM984610
- GEO:GSE78608
- Date submitted
- July 13, 2011
- Date released
- June 21, 2012
- Reference Epigenome
- ENCSR842HZB
Anisogenic replicates
Anisogenic replicate | Technical replicate | Summary | Biosample | Library |
---|---|---|---|---|
1 | 1 | Homo sapiens female adult (56 years) osteoblast primary cell | ENCBS464ENC | ENCLB555ALS |
2 | 1 | Homo sapiens male adult (62 years) osteoblast primary cell | ENCBS463ENC | ENCLB555ATZ |