Summary for ENCSR842HZB
doi:10.17989/ENCSR842HZB
Supersedes ENCSR786NTC
Summary
- Status
- released
- Description
- Reference epigenome for human osteoblast
- Donor diversity
- composite
- Assay
- ChIP-seq, RNA-seq, small RNA-seq, DNase-seq
- Target
- H3K4me1, H3K27ac, H3K36me3, H3K9me3, H3K27me3, H3K4me3, CTCF
- Biosample summary
- osteoblast primary cell
- Diseases
- Not reported
Attribution
ENCODE3 project
- Lab
- ENCODE Consortium
- Award
- U41HG006992 (J. Michael Cherry, Stanford)
- Project
- ENCODE
- External resources
Experiments in ENCSR842HZB
Experiments
10 experiments
Accession | Assay | Target | Donors | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|---|---|
| ENCSR000APF | ChIP-seq | CTCF | ENCDO271AAA, ENCDO834SRG | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000CUF | RNA-seq | ENCDO124AAA, ENCDO123AAA | Homo sapiens osteoblast female adult (56 years) and male adult (62 years) | Thomas Gingeras, CSHL | released | ||
| ENCSR000ELJ | DNase-seq | ENCDO271AAA | Homo sapiens osteoblast | Gregory Crawford, Duke | released | ||
| ENCSR000APL | ChIP-seq | H3K9me3 | ENCDO271AAA, ENCDO834SRG | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000API | ChIP-seq | H3K36me3 | ENCDO834SRG, ENCDO271AAA | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000APJ | ChIP-seq | H3K4me1 | ENCDO271AAA, ENCDO834SRG | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000ATH | ChIP-seq | H3K4me3 | ENCDO834SRG, ENCDO271AAA | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000APH | ChIP-seq | H3K27ac | ENCDO271AAA, ENCDO834SRG | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000AQS | ChIP-seq | H3K27me3 | ENCDO271AAA, ENCDO834SRG | Homo sapiens osteoblast | Bradley Bernstein, Broad | released | |
| ENCSR000CUW | small RNA-seq | ENCDO124AAA, ENCDO123AAA | Homo sapiens osteoblast female adult (56 years) and male adult (62 years) | Thomas Gingeras, CSHL | released |
Control experiments
1 control experiment
Accession | Control type | Biosample summary | Lab | Status | Cart |
|---|---|---|---|---|---|
| ENCSR000APU | input library | Homo sapiens osteoblast | Bradley Bernstein, Broad | released |