Experiment summary for ENCSR000BSE

doi:10.17989/ENCSR000BSE

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
CTCF
Biosample summary
Homo sapiens HCT116
Biosample Type
cell line
Replication type
isogenic
Description
CTCF ChIP-seq protocol v042211.1 on human HCT-116
Nucleic acid type
DNA
Fragmentation methods
see document
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
January 23, 2012
Date released
September 10, 2012
Annotation (gkmsvm-model)
Annotation (physical modeling)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag RegulomeDB_1_0Search for all Experiment with internal tag RegulomeDB_2_0Search for all Experiment with internal tag RegulomeDB_2_1Search for all Experiment with internal tag ccre_inputv1Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
21Homo sapiens HCT116 cell lineENCBS389ENCENCAB000AFRENCLB559JQP
11Homo sapiens HCT116 cell lineENCBS389ENCENCAB000AFRENCLB559JQQ