Experiment summary for ENCSR000BGF
doi:10.17989/ENCSR000BGF
Summary
- Status
- released
- Assay
- ChIP-seq (TF ChIP-seq)
- Target
- REST
- Biosample summary
- Homo sapiens GM12878
- Biosample Type
- cell line
- Replication type
- isogenic
- Description
- REST ChIP-seq protocol PCR2x on human GM12878
- Nucleic acid type
- DNA
- Fragmentation methods
- see document
- Platform
- Illumina Genome Analyzer IIx
- Controls
Attribution
ENCODE2 project
- Lab
- Richard Myers, HAIB
- Award
- U54HG004576 (Richard Myers, HAIB)
- Project
- ENCODE
- External resources
- Date submitted
- July 18, 2011
- Date released
- July 18, 2011
- Annotation (gkmsvm-model)
- Annotation (BPNet-model)
- Submitter comment
- Fastq file ENCFF000NZA contains reads of mixed lengths. Read lengths followed by respective number of reads: (32, 32310422), (36, 27398933).
- Factorbook
Encyclopedia Integration
Isogenic replicates
Isogenic replicate | Technical replicate | Summary | Biosample | Antibody | Library |
---|---|---|---|---|---|
2 | 1 | Homo sapiens GM12878 cell line | ENCBS110ENC | ENCAB000AJK | ENCLB559JPT |
1 | 1 | Homo sapiens GM12878 cell line | ENCBS110ENC | ENCAB000AJK | ENCLB559JPS |