Experiment summary for ENCSR000BGE

Summary

Status
released
Assay
ChIP-seq
Target
SRF
Biosample summary
Homo sapiens GM12878
Biosample Type
cell line
Replication type
isogenic
Description
SRF ChIP-seq protocol PCR2x on human GM12878
Nucleic acid type
DNA
Lysis method
see document
Extraction method
see document
Fragmentation method
see document
Size selection method
see document
Strand specificity
Non-strand-specific
Controls

Attribution

ENCODE2 project
Lab
Richard Myers, HAIB
Award
U54HG004576 (Richard Myers, HAIB)
Project
ENCODE
Date submitted
July 18, 2011
Date released
July 18, 2011
Submitter comment
Fastq files ENCFF000OFM and ENCFF000OFK contain reads of mixed lengths. Read lengths followed by respective number of reads: ENCFF000OFM (25, 12547305), (36, 53224706); ENCFF000OFK (25, 13747457), (36, 46616535).
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv4

Isogenic replicates

Isogenic replicateTechnical replicateSummaryBiosampleAntibodyLibrary
11GM12878 cell lineENCBS110ENCENCAB000ALEENCLB559KCI
21GM12878 cell lineENCBS110ENCENCAB000ALEENCLB559KDT