1. Experiments
  2. ChIP-seq
  3. Homo sapiens
  4. K562

Experiment summary for ENCSR000ATM

doi:10.17989/ENCSR000ATM

Alternate accession: ENCSR904UKV

Summary

Status
released
Assay
ChIP-seq (TF ChIP-seq)
Target
REST
Biosample summary
Homo sapiens K562
Biosample Type
cell line
Replication type
isogenic
Description
ChIP-seq on human K562 REST
Nucleic acid type
DNA
Library starting quantity
9.4ng [2-1]4.73ng [3-1]
Size range
200-600
Fragmentation methods
sonication (generic) [1-1]none [2-1]sonication (generic) [3-1]
Controls

Attribution

ENCODE2 project
Lab
Bradley Bernstein, Broad
Award
U54HG004570 (Bradley Bernstein, Broad)
Project
ENCODE
Aliases
bradley-bernstein:Project Element 44
Date submitted
August 6, 2012
Date released
August 6, 2012
Annotation (gkmsvm-model)
Annotation (BPNet-model)
Tags
Search for all Experiment with internal tag ENCYCLOPEDIAv1Search for all Experiment with internal tag RegulomeDB_2_2Search for all Experiment with internal tag ENCYCLOPEDIAv2Search for all Experiment with internal tag RegulomeDB_2_1

Encyclopedia Integration

Isogenic replicates

Isogenic replicate
Technical replicate
Summary
Biosample
Antibody
Library
11Homo sapiens K562 cell lineENCBS674MPNENCAB000AKIENCLB695AFM
21Homo sapiens K562 cell lineENCBS658RMIENCAB584CZQENCLB579USE
31Homo sapiens K562 cell lineENCBS979ZKWENCAB937ZMFENCLB736WCC

Files

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File format
Output type
Replicates

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